Does Directadmin counts InnoDB tables?

No.

Two important disk-based resources managed by the InnoDB storage engine are its tablespace data files and its log files. If you specify no InnoDB configuration options, MySQL creates an auto-extending 10MB data file named ibdata1 and two 5MB log files named ib_logfile0 and ib_logfile1 in the MySQL data directory.

See http://dev.mysql.com/doc/refman/5.0/en/innodb-configuration.html for details.
 
Still cant see how it'll be counted as the Innob databases are via *.idb's, the data/log files are just there for backup incase they crash? No? I've only worked with Innob's with <cough>Plesk<cough>, so excuse my ignorance.
 
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